Synthesize Bio

by Synthesize Bio

SSE

291 downloads

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Website

About

Generate gene expression from a virtual human

Details

Author: Synthesize Bio
Downloads: 291
Transport: SSE
Categories: Search

Setting up with Highlight

This MCP is not yet compatible with Highlight’s one-click setup. However, you can still use it with Highlight by following these steps:

Download and install Highlight from highlightai.com/download
Navigate to the plugins tab and select "Add Custom Plugin"
Configure the plugin with the settings below

Plugin Name Synthesize Bio

Command (node, npx, python, etc.)

Please refer to the README for specific instructions on how to obtain API keys or other required environment variables.
Enable "Start Automatically" if you want the plugin to start when Highlight launches

Setting up with Cursor

Open Cursor's settings
Navigate to the MCP section
Click "Add new Global MCP server"
Copy and paste the configuration below based on your operating system

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

Setting up with Claude Desktop

Open Claude Desktop's settings
Go to the Integrations tab
Click "Add MCP Server"
Use the configuration below based on your operating system

Note: Make sure Claude Desktop is running before attempting to connect.

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

Setting up with Windsurf

Open Windsurf's preferences
Go to the Integrations section
Click "Add MCP Integration"
Use the configuration below based on your operating system

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

Setting up with Cline

Open Cline's settings
Navigate to the Integrations section
Click "Add MCP Server"
Copy and paste the configuration below based on your operating system

Note: Make sure to restart Cline after adding the configuration.

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

Setting up with Goose

Open Goose's preferences
Go to the Integrations tab
Select "MCP Servers"
Click "Add New Server"
Use the configuration below based on your operating system

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

JSON

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

From the repository

{
  "mcpServers": {
    "synthesize-bio": {
      "type": "http",
      "url": "https://app.synthesize.bio/api/mcp"
    }
  }
}

Claude Desktop / Cursor

Paste into your MCP client config file to install this server.

{
    "mcpServers": {
        "synthesize bio": {
            "synthesize-bio": {
                "type": "http",
                "url": "https://app.synthesize.bio/api/mcp"
            }
        }
    }
}

McpServers

{
    "synthesize-bio": {
        "type": "http",
        "url": "https://app.synthesize.bio/api/mcp"
    }
}

Synthesize Bio generates and analyzes gene-expression data from a virtual human using natural-language experiment descriptions. Its connector gives assistants synthetic biology context for bulk and single-cell RNA-seq style workflows.

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Synthesize Bio

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Details

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Setting up with Highlight

Setting up with Cursor

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Setting up with Claude Desktop

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JSON

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Setting up with Windsurf

JSON

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Setting up with Cline

JSON

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JSON

Setting up with Goose

JSON

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JSON

From the repository

Claude Desktop / Cursor

McpServers

Install

About

Details

Jump to

Setting up with Highlight

From the repository

Claude Desktop / Cursor

McpServers

Install

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