Alliance of Genome Resources (JS)
About
A high-performance JavaScript server for the Alliance of Genome Resources (AGR) MCP.
Details
- Author
- nuin
- Categories
- Database, Other
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Setup
Install Alliance of Genome Resources (JS) in your MCP client (Claude Desktop, Cursor, Windsurf, and others).
Repository: https://github.com/nuin/agr-mcp-server-js
Follow the installation instructions in the repository README, then restart your MCP client.
A high-performance JavaScript server for the Alliance of Genome Resources (AGR) MCP.
MCP server for queryingAlliance of Genome Resources- genomics data across model organisms.
No installation required. Add to your MCP client config:
{ "mcpServers": { "agr-genomics": { "command": "npx", "args": ["-y", "agr-mcp-server"] } } }
{ "mcpServers": { "agr-genomics": { "command": "agr-mcp-server" } } }
- "Search for BRCA1 genes in human"
- "What genes are involved in DNA repair?"
- "Get information about HGNC:1100"
- "Find orthologs of insulin gene"
- "What diseases are associated with TP53?"
- "Show me expression data for daf-2 in worm"
- "Find all human genes with kinase activity"
- "Query AllianceMine for mouse genes on chromosome 11"
Human, mouse, rat, zebrafish, fly, worm, yeast, xenopus
Find human genes with BRCA in symbol: - from: Gene - select: primaryIdentifier, symbol, name - where: organism.shortName = "H. sapiens", symbol CONTAINS "BRCA"
Gene_Alleles - Find alleles for a gene Gene_DOTerm - Disease annotations for a gene Gene_GOTerms - GO annotations for a gene GOTerm_Genes - Find genes by GO term
List management operations (mine_create_list,mine_add_to_list,mine_delete_list) require an AllianceMine API token:
{ "mcpServers": { "agr-genomics": { "command": "npx", "args": ["-y", "agr-mcp-server"], "env": { "ALLIANCEMINE_TOKEN": "your-token-here" } } } }
- Alliance of Genome Resources API
- AllianceMine
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